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Bioinformatics - New York State - Large Scale Computing

geWorkbench v1.0.3 is available for download.

ARACNE and SPLASH, are now available for download.

Usage Fees -The Core Facility has implementeda fee schedule for access to its resources. Please contact us with any questions.

Introduction - The Facility offers a comprehensive set of tools and databases for everything from quick special projects to large scale sequence analysis and software development.

The Facility in Detail - Hardware acceleration of common Bioinformatics algorithms on the Paracel GeneMatcher2 and BlastMachine, sophisticated software for transcript and genome assembly, plus much more...

A high-performance 90 CPU Beowulf Linux Cluster is available for parallel MPI and standard serial jobs.

Our slide presentations about using the Core Facility are available in the Tutorials & Examples section.

ACCOUNT REGISTRATION: Online Facility Registration Form

Presentations in PDF format from the recent NCI caBIG/caBIO presentation (3/12/2004) at the Columbia Genome Center are available.

Core Facility
geWorkbench v1.0.3 is eleased onMay 17, 2006________________
  caWorkBench3.0 released on November 3, 2005 _________________

ARACNE and SPLASH, are released on April 30, 2005.

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A high-performance 90 CPU Beowulf Linux Cluster is now available for parallel MPI and standard serial jobs.
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  We now require that Secure Shell (ssh) and Secure ftp (sftp) be used to log into Facility machines.
 
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